Join the mission to realize the full potential of peptide modality

Our team brings together exceptional talent with a passion to explore uncharted territory and a laser focus on bringing new medicines to patients — with a sense of urgency.

Life at Pinnacle Medicines

Grow your expertise on problems that matter.

At Pinnacle Medicines, you'll work closely with scientists across the full spectrum of drug discovery - from chemistry and biology to formulation and CMC.

We've deliberately built a culture without silos because breakthroughs often happen at the interfaces between disciplines. Program updates, data, and decisions are shared openly across the company, and everyone — regardless of seniority — is encouraged to contribute and push the science forward.

For early-career researchers, this means sitting at the table from day one with access to the raw data, candid conversations, and the experience of those who've successfully brought new medicines to patients.

Breakthrough science runs on rigor and curiosity in equal measure. At Pinnacle, both are valued.

Current Opportunities

Open positions

We are building a multidisciplinary team of scientists, engineers, and drug development experts advancing next-generation peptide therapeutics. Explore opportunities to contribute to our growing discovery and development programs.

Lead structural biology strategy to unlock the molecular design of next-generation peptide therapeutics. Read more

location_onDoylestown, PA
timer_5Full time

About the Role

This role will be responsible for developing and executing forward-looking protein science, structural biology and biophysics strategy. The ideal candidate will have a deep understanding of the unique characteristics of peptides as a therapeutic modality and accordingly position biophysics and structural biology as a key differentiator of our discovery platform. The candidate will have a clear perspective on how structural biology can be integrated with traditional structure-based design and emerging AI-based methods. The candidate will be part of the core discovery teams and effectively integrate biophysics and structural biology at all stages from hit ID to LO.

Responsibilities

  • Oversee protein science and structure biology strategies and design biophysics experiments to elucidate structural basis of a MoA
  • Collaborate closely with CADD and medicinal chemistry to integrate structural biology and biophysical data to inform structure-based design
  • Manage multiple protein science and structural biology CROs and vendors
  • Establish internal capabilities for analyzing and post-processing raw crystallography, cryo EM, NMR and HDX data from vendors
  • Identify emerging biophysics and structural biology technologies and set up strategic collaboration with academia and CROs
  • Contribute to scientific publications and patent applications

Qualifications

  • PhD in Structural Biology, Biophysics, Biochemistry or related fields
  • 10+ years of experience with 5+ years of working in drug discovery setting in academia or industry
  • Demonstrated experience of leading and managing internal teams, CROs, budgets, timelines and resources
  • Familiarity with medicinal chemistry principles utilized in drug discovery is required
  • Demonstrated ability of designing and troubleshooting protein science and biophysical assay protocols
  • Strong publication track record and established reputation in the structural biology community with deep expertise in X-ray crystallography and/or cryo-EM
  • Track record of creatively leveraging diverse biophysical methods to advance medicinal chemistry and elucidate MoA
  • Familiarity with AI tools, physics-based CADD and cheminformatics platforms is preferred
  • Recent experience of working on Linux HPC clusters with python scripting is highly desirable
  • Excellent communication and interpersonal skills
  • Strong team player and comfortable with fast-paced startup environment

Build AI and machine learning systems that power our next-generation peptide discovery platform. Read more

location_onDoylestown, PA
timer_5Full time

About the Role

We are seeking a creative and driven Machine Learning Engineer to help advance PinSilico—our AI and physics-powered peptide discovery platform. This role sits at the intersection of machine learning, computational chemistry, and scientific software engineering at the forefront of drug discovery. You will learn directly from seasoned drug hunters across chemistry, biology, and computation, gaining firsthand exposure to how new medicines are discovered and developed for patients. This is a high-impact, foundational hire shaping the core of our computational platform.

Responsibilities

  • Develop and deploy generative and predictive machine learning models for peptide design, including sequence, structure, and property prediction
  • Build and maintain property prediction models that track experiments and generate actionable insights
  • Integrate ML models into existing cheminformatics and computational chemistry pipelines, with an emphasis on scalability and reproducibility
  • Develop workflows that scale across heterogeneous HPC environments (on-premise and cloud)
  • Build and maintain CI/CD pipelines for model testing and deployment
  • Implement advanced data curation and splitting strategies that go beyond standard random sampling to prevent data leakage
  • Track the latest developments in AI-based protein and molecular design, evaluating new methods for internal adoption

Qualifications

  • Bachelor's degree or higher in Computer Science, Applied Mathematics, Computational Chemistry, or a related field, with 3+ years of industry experience developing ML applications
  • Deep understanding of the mathematical foundations and architectures underlying modern ML models for molecular and protein design (e.g., VAEs, transformers, GNNs, diffusion models, equivariant networks)
  • Experience with fine-tuning techniques to adapt large, pre-trained models for specialized tasks
  • Fluency in Python and familiarity with ML frameworks used in scientific computing (e.g., PyTorch, JAX, or TensorFlow)
  • Familiarity with cheminformatics and structural biology libraries (e.g., RDKit, DeepChem, Biopython, or equivalents)
  • Excellent communication skills with the ability to convey complex computational concepts to scientists across disciplines

Preferred

  • Experience in a fast-paced biotech or startup environment
  • Familiarity with physics-based molecular simulations, including docking, MD, and free energy methods
  • Linux system administration experience

Lead quality and analytical development strategy for clinical-stage peptide therapeutics. Read more

location_onDoylestown, PA
timer_5Full time

About the Role

The Senior Director of Quality Assurance and Analytical Development is responsible for leading and executing QA strategy and analytical development activities to support the development and registration of oral and injectable drug products. This role ensures compliance with global regulatory standards (FDA, EMA, NMPA, ICH) while building robust analytical methods, stability programs, and quality systems across development and manufacturing. The candidate will be based in Doylestown, PA.

Quality Assurance (QA) Responsibilities

  • Establish and maintain GMP-compliant quality systems supporting drug substance, drug product development and manufacturing
  • Provide QA oversight for: analytical method development and validation, stability studies, drug substance and drug product manufacturing CDMO and CRO activities, raw material and clinical supply activities
  • Lead quality risk management (ICH Q9), deviations, CAPAs, change control, and investigations
  • Support regulatory inspections and audits (FDA, EMA, client audits)
  • Review and approve SOPs, protocols, reports, and specifications, batch records and quality agreements
  • Ensure QA alignment with ICH Q7, Q8, Q10, and Q11 guidelines

Analytical Development Responsibilities

  • Lead analytical development strategy for oral and injectable dosage forms
  • Oversee development, qualification, validation and transfer of: HPLC/UPLC, GC, LC-MS methods, Dissolution, content uniformity, and impurity profiling, Stability-indicating methods, microbiology methods, cleaning validation methods
  • Ensure methods are phase-appropriate for early-stage clinical development
  • Guide specification setting for drug substance and drug product
  • Ensure data integrity (ALCOA+) and lifecycle management of analytical methods

Regulatory & CMC Support

  • Contribute to IND, NDA, and MAA submissions (Module 3)
  • Act as QA/analytical SME for regulatory interactions

Leadership & Strategy

  • Manage external vendors (CDMOs, analytical labs)
  • Build and lead QA and analytical development team as portfolio expands
  • Mentor staff and foster a culture of quality and scientific rigor

Qualifications

  • PhD, MS, or BS in Analytical Chemistry, Pharmaceutical Sciences, Chemistry, or related field
  • 10+ years in pharmaceutical QA and/or analytical development experience
  • Strong experience with oral drug products (solid and/or liquid)
  • Direct experience supporting IND/NDA filings, and regulatory inspections
  • Proven experience working with CDMOs, vendor and stakeholder management
  • Proven experience in analytical method development and validation (ICH Q2), stability program design (ICH Q1), dissolution, GMP and data integrity compliance and regulatory documentation and inspection readiness
  • Strong Strategic thinking with hands-on execution ability. High attention to detail and scientific rigor
  • Up to 10% of domestic or international travel is required
  • Experience with oral peptides or enabling technologies (e.g., permeation enhancers, modified release) is preferred

Drive the development and GMP manufacturing of innovative oral peptide formulations. Read more

location_onShanghai, China
timer_5Full time

About the Role

We are seeking a Senior Director, Oral Formulation Process Development & Manufacturing to lead drug product process development and clinical GMP manufacturing activities for oral peptide programs at our Shanghai site. This role will provide strategic and technical leadership across CDMO partnerships to enable robust, scalable, and compliant manufacturing processes for complex oral peptide formulations. The ideal candidate brings deep expertise in oral dosage form development, strong hands-on manufacturing knowledge, and demonstrated success leading external partners through clinical manufacturing in a fast-paced biotech environment.

Responsibilities

  • Lead oral formulation process development and clinical GMP manufacturing for multiple oral dosage forms, ensuring technical excellence and on-time delivery
  • Provide strategic oversight and technical direction to CDMOs for development, scale-up, and GMP manufacturing. Establish clear expectations, monitor performance, proactively identify process risks, and implement mitigation strategies
  • Troubleshoot technical and manufacturing challenges efficiently to maintain aggressive development timelines. Ensure deviations and investigations are properly executed and closed in compliance with GMP requirements
  • Evaluate and apply emerging pharmaceutical manufacturing technologies to oral peptide formulations, collaborating with internal scientists, engineers, and external partners to drive innovation
  • Design and oversee experimental studies to address key process development questions. Contribute hands-on laboratory support when needed
  • Partner cross-functionally with Process Chemistry/API, Formulation Development, Analytical Development, Pre-formulation, Quality, Regulatory, and other teams to ensure integrated CMC strategy and smooth project progression
  • Ensure appropriate documentation, data integrity, and technical reports to support regulatory filings (IND/CTA), publications, and intellectual property
  • Identify and evaluate vendors, technologies, and collaborators to strengthen manufacturing capabilities and long-term scalability

Qualifications

  • Ph.D., Master's degree, or equivalent in Pharmaceutical Sciences, Chemical Engineering, or a related discipline
  • Minimum 7+ years of relevant industry experience in oral formulation process development and GMP manufacturing
  • Extensive experience developing and scaling oral dosage forms with the ability to operate independently in a leadership capacity
  • Strong understanding of formulation science, pharmaceutical engineering principles, GMP regulations, and analytical characterization
  • Demonstrated experience leading CDMOs/CROs to successful clinical manufacturing outcomes
  • Proven track record of technical innovation, including patent co-inventorship and/or peer-reviewed publications
  • Ability to collaborate effectively across global teams and time zones with clear, respectful, and efficient communication
  • Willingness to travel up to 20% domestically and internationally

Preferred Skills

  • Experience managing development budgets and aligning CMC activities with broader corporate strategy
  • Proficiency in data analysis and visualization tools
  • Hands-on GMP manufacturing experience with tableting encapsulation, coating, granulation, hot-melt extrusion, milling, and spray drying
  • Demonstrated agility, strong learning capability, and high standards for execution

Lead cross-functional program strategy across Pinnacle’s peptide discovery and development portfolio. Read more

location_onDoylestown, PA
timer_5Full time

About the Role

We are seeking a strategic and execution-focused Executive Director of Project Management to lead cross-functional program management across Pinnacle's peptide discovery and development portfolio. This individual will serve as a core member of the development leadership team and will be responsible for driving integrated program strategy, governance, timelines, and resource alignment from early discovery through IND-enabling activities and into early clinical development. The ideal candidate brings deep experience managing complex drug development programs in biotech environments and has demonstrated success aligning scientific, regulatory, CMC, and external partner functions to deliver milestone-driven outcomes. The position will be reporting to the Head of Translational Science.

Responsibilities

  • Lead and oversee cross-functional program management across discovery and development programs
  • Partner with Research, DMPK, Bioanalytics, Toxicology, CMC, Regulatory, and Clinical teams to build and maintain integrated development plans
  • Drive scenario planning, risk mitigation strategies, and milestone forecasting to support portfolio prioritization
  • Establish and manage governance structures, including program reviews and executive updates
  • Ensure alignment of timelines, budgets, and resources with corporate strategy
  • Identify and proactively resolve program risks, bottlenecks, and cross-functional conflicts
  • Lead external program oversight for CROs, CDMOs, and strategic collaborators as needed
  • Develop scalable project management processes appropriate for a growing biotech organization
  • Support due diligence activities and business development evaluations

Qualifications

  • Requires a PhD or MS in life sciences, or equivalent experience, with a minimum of 10 years of drug development program management experience in biotech or pharmaceutical environments
  • Demonstrated success leading cross-functional teams through IND-enabling programs and early clinical development
  • Strong understanding of nonclinical, CMC, regulatory, and early clinical development processes
  • Experience implementing governance frameworks and portfolio management tools
  • Exceptional communication, influence, and executive presentation skills

Preferred Skills

  • Experience with peptide or macrocyclic drug development
  • Experience building PM functions in early-stage biotech settings
  • PMP certification or formal program management training preferred

Lead pharmacokinetics and drug metabolism strategy across a growing peptide pipeline. Read more

location_onDoylestown, PA
timer_5Full time

About the Role

We are seeking a highly motivated and experienced Senior Director of DMPK at our Doylestown, PA site. The candidate will work within the discovery team and be responsible for ADME/DMPK aspects of all of our peptide discovery and development pipeline, including lead identification/optimization, FIH translation, and non-clinical packages to support regulatory filings. The candidate must have demonstrated an ability to work collaboratively in a fast-paced, dynamic environment with excellent scientific and communication skills. The position will be reporting to the Head of Translational Science.

Responsibilities

  • Lead and manage ADME and DMPK functions, design and implement strategies for ADME and DMPK studies, interpret data and integrate it into overall project plans
  • Design and execute mechanistic and translational studies to evaluate the pharmacokinetic and metabolic properties of macrocyclic peptides to influence design, lead selection, and drive PK/PD translation and human dose prediction
  • Advance the use of modeling techniques to accelerate lead selection/optimization and the progression of clinical candidates with high probability of success
  • Collaborate with internal and external partners to provide strategic DMPK guidance, and plan and execute DMPK studies to support preclinical and clinical drug development
  • Manage DMPK budget and provide budget planning
  • Provide DMPK expertise to project teams, ensure compliance with industry regulations and standards in all DMPK activities, and advise on the DMPK aspects of regulatory submissions and author regulatory documents from FIH through registrational filing
  • Stay informed of external advancements of DMPK for peptide drug discovery and contribute to the evaluation and implementation of cutting-edge technologies and methodologies
  • Participate in due diligence and business development activities as needed

Qualifications

  • Requires PhD in Pharmacokinetics, Pharmacology, Biochemistry, or a related discipline with minimum of 7 years of relevant DMPK experience in a biotechnology or pharmaceutical environment
  • At least 3 years of management experience, including staff development and budget responsibility
  • Demonstrated expertise and successful experiences of independently leading DMPK efforts in small molecule or peptide drug discovery teams within a fast-paced, dynamic and collaborative environment
  • Capable of analyzing and interpreting complex ADME/DMPK data, ability to extract preclinical PKPD/efficacy and safety data and translate to human setting to guide therapeutic design and candidate selection, and implementation of effective de-risking plans
  • Strong problem-solving and leadership skills, highly motivated and self-driven with a keen interest in staying at the forefront of DMPK science and technology
  • Strong knowledge of relevant regulations and industry standards

Preferred Skills

  • Prior experience with multiple therapeutic modalities (e.g. small molecules, peptides, biologics, etc)
  • In-depth understanding and experience in discovery bioanalytical science, including immunoassay, LC/MS
  • In-depth understanding of modeling principles, including noncompartmental analysis. Hands-on experience with modeling using various software packages
  • Knowledge of novel and translatable in vitro cellular models and/or in vivo models
  • Strong knowledge of relevant regulations and industry standards, and experience with regulatory submissions are highly desirable

Shape nonclinical safety strategy for next-generation peptide therapeutics. Read more

location_onDoylestown, PA
timer_5Full time

About the Role

We are seeking a strategic and scientifically rigorous Senior Director of Toxicology to lead nonclinical safety strategy across Pinnacle's peptide development portfolio. This role will be responsible for designing and executing toxicology programs to support IND-enabling studies, regulatory submissions, and early clinical development. The successful candidate will serve as the nonclinical safety lead on project teams and will work closely with DMPK, Bioanalytics, and Regulatory to ensure comprehensive and risk-mitigated development strategies. The position will be reporting to the Head of Translational Science.

Responsibilities

  • Develop and implement nonclinical safety strategies from discovery candidate selection through IND submission and beyond
  • Design and oversee GLP toxicology studies including repeat-dose toxicity, safety pharmacology, genotoxicity, and other required assessments
  • Collaborate with DMPK and Bioanalytics to integrate exposure and toxicokinetic data into safety evaluations
  • Lead regulatory interactions related to nonclinical safety, including authoring and reviewing IND/CTA sections
  • Oversee external toxicology CROs and ensure high-quality study conduct and reporting
  • Provide scientific interpretation of toxicology findings and develop risk mitigation plans
  • Support translational safety assessments and FIH dose justification
  • Participate in due diligence and external partnership evaluations as needed

Qualifications

  • PhD, DVM, or equivalent advanced degree in Toxicology, Pathology, Pharmacology, or related discipline with a minimum of 8 years of industry experience
  • Demonstrated leadership of IND-enabling toxicology programs
  • Strong knowledge of FDA and ICH regulatory requirements for nonclinical safety
  • Experience managing GLP studies and external CRO partnerships
  • Excellent cross-functional collaboration and communication skills

Preferred Skills

  • Experience with peptide or biologic modalities
  • Board certification (DABT) preferred
  • Experience supporting global regulatory filings

Lead bioanalytical strategy supporting pharmacokinetics, toxicology, and translational science. Read more

location_onDoylestown, PA
timer_5Full time

About the Role

We are seeking a highly experienced Senior Director of Bioanalytics to lead bioanalytical strategy and execution across Pinnacle's peptide discovery and development programs. This role will be responsible for establishing and overseeing bioanalytical platforms to support pharmacokinetics, toxicology, and translational studies from discovery through clinical development. The candidate will play a critical role in assay development, method validation, and regulatory-compliant bioanalysis to enable robust PK/PD characterization and regulatory submissions. The position will be reporting to the Head of Translational Science.

Responsibilities

  • Lead bioanalytical strategy across discovery, nonclinical, and clinical development programs
  • Design, develop, validate, and oversee bioanalytical assays (LC-MS/MS, ligand binding assays, hybrid assays) for peptides and related modalities
  • Provide scientific leadership for assay sensitivity, selectivity, and robustness appropriate for macrocyclic peptide characterization
  • Collaborate with DMPK and Toxicology to ensure integrated PK, exposure, and biomarker strategies
  • Oversee external CRO bioanalytical partners and ensure GLP/GCP compliance where applicable
  • Contribute to regulatory filings including IND and CTA submissions, author bioanalytical sections, and respond to agency inquiries
  • Establish internal standards and best practices for assay development, validation, and documentation
  • Manage bioanalytical budgets and vendor selection
  • Stay current with emerging technologies in peptide bioanalysis and implement innovative methodologies where appropriate

Qualifications

  • PhD in Analytical Chemistry, Bioanalytical Sciences, Pharmaceutical Sciences, or related discipline with a minimum of 8 years of relevant industry experience
  • At least 3 years of leadership experience managing teams and external vendors
  • Demonstrated expertise in LC-MS/MS and ligand-binding assay development for peptides or biologics
  • Strong understanding of regulatory guidance for bioanalytical method validation (FDA, EMA)
  • Experience supporting IND-enabling and early clinical programs

Preferred Skills

  • Experience with macrocyclic peptides
  • Experience integrating bioanalytical data into PK/PD modeling frameworks
  • Familiarity with immunogenicity assessment strategies

Benefits & perks

At Pinnacle Medicines, we believe the people advancing our science should feel supported in every part of their lives. Our benefits program is designed to promote health, financial security, and work-life balance.

Benefits highlights:

  • 20 days of paid time off annually plus company holidays and year-end winter shutdown
  • 401(k) retirement plan with Safe Harbor company matching
  • Comprehensive medical, dental, and vision coverage options
  • Company-paid life insurance and disability protection
  • Health Savings Accounts (HSA) and Flexible Spending Accounts (FSA)
  • Employee Assistance Program and lifestyle benefits including commuter programs, insurance options, and employee discounts

Ready to help advance the future of therapeutics?

We are growing and continuously seeking outstanding talent. If you do not see an open role that fits your background today, please email [email protected] and share how you could help us build a leading peptide discovery company.